Perbandingan Metode Ekstraksi DNA Guanidium isothiocyanate dan Filtrasi tube Terhadap Kualitas Hasil Pemeriksaan PCR Plasmodium falciparum
DOI:
https://doi.org/10.62588/otusedu.2025.v3i3.0290Keywords:
DNA Extraction, Method, PCR, Plasmodium falciparumAbstract
This study aims to compare the results of Plasmodium falciparum detection via PCR using two DNA extraction methods: the Guanidium isothiocyanate method (with phenol-chloroform) and the tube filtration method (Spin column). The research method used was a descriptive survey with a retrospective research design. This study was retrospective, using two samples of positive malaria patients from the NTB Provincial General Hospital. PCR results were analyzed using agarose gel electrophoresis to identify DNA bands. The results showed that the tube filtration method produced brighter and clearer DNA bands, while the Guanidium isothiocyanate method produced less clear bands. This indicates that the tube filtration method is more effective in producing pure DNA that can be detected well by PCR. It can be concluded that the tube filtration method is superior because it is practical, safe, and the accuracy of the results of Plasmodium falciparum DNA detection is of higher quality than the Guanidium isothiocyanate method.
References
Ariyanti, Y., & Sianturi, S. (2019). Ekstraksi Dna Total Dari Sumber Jaringan Hewan (Ikan Kerapu) Menggunakan Metode Kit For Animal Tissue. Journal of Science and Applicative Technology, 3(1), 40. https://doi.org/10.35472/jsat.v3i1.111
Elmesery, M. (2025, October 19). Different dna extraction methods. Most common dna extraction method. https://praxilabs.com/en/blog/2022/08/24/7
Ghorbal, M., Gorman, M., Macpherson, C. R., Martins, R. M., Scherf, A., & Lopez-Rubio, J.-J. (2014). Genome Editing In The Human Malaria Parasite Plasmodium Falciparum Using The Crispr-Cas9 System. Nature Biotechnology, 32(8), 819–821. https://doi.org/10.1038/nbt.2925
Handayani, S. O., & Putri, D. H. (2021). Comparison of Fenol-kloroform Method and Mini-Prep Ctab Method For Chili (Capsicum annum l.) Plant DNA isolation Perbandingan Metode Fenol-Kloroform Dan Mini-Prep Ctab Untuk Isolasi DNA Tanaman Cabai (Capsicum annum L.). Serambi Biologi, 6(2), 37–41. http://ejournal.unp.ac.id/students/index.php/bio/index
Kalua, A. L., Veronika H, & Salaki, D. T. (2022). Sistem Pakar Diagnosa Penyakit Malaria Dengan Certainty Factor Dan Forward Chaining. Journal of Information Technology, Software Engineering and Computer Science (ITSECS), 1(1), 22–34. https://doi.org/10.58602/itsecs.v1i1.10
Kamaliah, K. (2017). Perbandingan Metode Ekstraksi Dna Phenol-Chloroform Dan Kit Extraction Pada Sapi Aceh Dan Sapi Madura. BIOTIK: Jurnal Ilmiah Biologi Teknologi dan Kependidikan, 5(1), 60. https://doi.org/10.22373/biotik.v5i1.2975
Katevatis, C., Fan, A., & Klapperich, C. M. (2017). Low Concentration Dna Extraction And Recovery Using A Silica Solid Phase. PLOS ONE, 12(5), e0176848. https://doi.org/10.1371/journal.pone.0176848
Minarsih, N., Fatchiyah, R., & Hengkengbala, J. (2016). Evaluasi Kuantitas Dan Kemurnian Dna Dengan Spektrofotometer. Jurnal Genetika Dan Biologi Molekuler, 12(4), 221–229.
Mozi̇Oğlu, E., Akgöz, M., Tamerler, C., & Kocagöz, Z. T. (2014). A Simple Guanidinium Isothiocyanate Method For Bacterial Genomic DNA Isolation. Turkish Journal Of Biology, 38, 125–129. https://doi.org/10.3906/biy-1308-7
Organization, W. H. (2016). Who Prequalification Of In Vitro Diagnostics Public Report. Product: Xpert HIV-1 Qual Assay, WHO Reference Number: PQDx, 0259–070.
Shin, J. H. (2013). Nucleic Acid Extraction Techniques. IN Y.-W. Tang & C. W. Stratton (EDS.), Advanced Techniques in Diagnostic Microbiology (pp. 209–225). Springer US. https://doi.org/10.1007/978-1-4614-3970-7_11
Tüzmen, Ş., Baskın, Y., Feyda Nursal, A., Eraslan, S., Esemen, Y., Çalıbaşı, G., Banu Demir, A., Abbasoğlu, D., & Hızel, C. (2018). Chapter 14—Techniques For Nucleic Acid Engineering: The Foundation Of Gene Manipulation. In D. Barh & V. Azevedo (EDS.), Omics Technologies and Bio-Engineering (pp. 247–315). Academic Press. https://doi.org/10.1016/B978-0-12-804659-3.00014-2
Zheng, M., Zhang, M., Li, H., Wu, S., Zhao, Y., Zhang, J., Zhou, Y., Jalloh, M. B., Zhang, K., Chen, L., Mi, Z., Cui, Y., & Hou, L. (2024). Rapid, Sensitive, And Convenient Detection Of Plasmodium Falciparum Infection Based On Crispr And Its Application In Detection Of Asymptomatic Infection. Acta Tropica, 249, 107062. https://doi.org/10.1016/j.actatropica.2023.107062
Downloads
Published
Issue
Section
License
Copyright (c) 2025 Edy Kurniawan, Pipin Amalia, Hardin Hardin (Author)

This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.








